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SRX3586603: GSM2936665: A549_shNC_TGFbeta; Homo sapiens; RNA-Seq
1 ION_TORRENT (Ion Torrent Proton) run: 19.9M spots, 1.9G bases, 1.3Gb downloads

Submitted by: NCBI (GEO)
Study: Effect of NORAD shRNA on A549 cells treated with TGF-beta
show Abstracthide Abstract
We evaluated the effect of NORAD (also known as LINC00657 or LOC647979) shRNA on TGF-beta induced changes in the gene expression in A549 cells by RNA-seq. Overall design: mRNA expression was determined in a lung adenocarcinoma cancer cell line A549 infected with NORAD shRNA-expressing lentiviral vector and treated with TGF-beta.
Sample: A549_shNC_TGFbeta
SAMN08369973 • SRS2855210 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Ion Torrent Proton
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNAs were extracted as described previously (Mizutani et al., 2011, J Biol Chem). Libraries were prepared using Dynabeads mRNA DIRECT Purification Kit and Ion Total RNA-seq kit v2 (Thermo Fisher Scientific). Sequencing was performed as described (Sakurai et al., 2016, Oncogene).
Experiment attributes:
GEO Accession: GSM2936665
Links:
Runs: 1 run, 19.9M spots, 1.9G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR649755919,927,8991.9G1.3Gb2018-04-29

ID:
4972105

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